Title: Tree Models for Assessing Covariate-Dependent Method Agreement Authors: Siranush Karapetyan, Alexander Hapfelmeier, Achim Zeileis Abstract: Method comparison studies explore the agreement of measurements made by two or more techniques, devices, or methods. With continuously scaled measurements, agreement is usually evaluated by the well-established Bland-Altman analysis. However, the underlying assumption is that differences between methods are identically distributed for all observational units or subjects and in all application settings. Therefore, we propose the concept of conditional method agreement that employs differences in covariates to explain differences in the agreement between two methods. More specifically, a model-based recursive partitioning approach is developed, called conditional method agreement trees (COAT). It is accompanied by an R implementation in package "coat", currently available from https://github.com/Hapfelmeier/coat. Both the method and its implementation are discussed, illustrated with accelerometer data, and explored further in a simulation study.